Hey Toby,
in my experiences, balancing is pretty crucial. if your copter is balanced perfectly, the motors will all run fairly equal rpm's.....if it is nose heavy lets say, (using my quad-copter as the example) and you input some back trim to level it out, the front 2 motors will have to run higher rpms than the back to compensate for the weight on the nose. then it will fly a little wonky, plus as your battery starts to go down, the nose will increasingly drop. (at least that was the case with mine prior to balancing it out really well)
As far as balancing props, I used a magnetic balancer to balance each prop as precision as possible, then I install each prop separately and run up the motor, moving the prop clockwise around the hub till I feel and hear the sweet spot. That helps even more to reduce vibs. Gyros on a multi-copter, or a reg heli.....do not especially like vibrations. the more you can eliminate vibs, the better your gyro(s) will work for you.
I have a Tri-copter based off of Davids design, a miniature aircraft rotor x 404 quad, and also a quad frame that I designed running the latest KK blackboard. All of them experience turbelence while descending in a hover, so far, every multi-rotor that I have ever flown has this tendency. Just part of the deal i guess. One thing that I have done to sort of eliminate this, is gently lower the nose so that it descends in forward flight rather then descending in a hover. I have also lowered the nose and done a gentle spiral to lose altitude.....both of which get rid of the wonkiness that happens when descending straight down in a hover.
I watched your "tricopter flying high" video....great job flying man! It also looks like you got your gopro attached really well....cuz there are zero vibrations in your footage. Excellent work!
Hope this helps man!
Cheers,
Eric