I've seen a good amount of Eaglets built this way in the WN facebook group. I didn't think building it this way would be so popular.
A couple things I can remember being problems when I built mine is the tailwheel causing all sorts of CG problems and the battery tray size. I should have gone a lot smaller with the tailwheel - I think the wheel on it is a little over 1/2 inch diameter, when I probably could have gotten away with half that. It needed nose weight. Don't know exactly how much, I just put weight in till it balanced out right. I would suggest using a skid - when I built my Q-tee I was initially worried about it causing all sorts of problems but eventually I got the hang of it and now I never ground loop it. Just be sure to add about 1-2 degrees of toe-in on either wheel which will really help make it a lot less squirrelly on the ground.
I don't know if you'll have the battery tray problem like I did. Initially my idea was to put the ESC and receiver in the battery tray and put the battery on the top side, with a top hatch. It seemed like it would be easier to get to the battery that way, and it was until I discovered that 2s wasn't enough power and my 3s batteries didn't fit in the tray! So I had to move the ESC and receiver to the top (which is technically where they're supposed to go in the first place) Unfortunately when I added the slot for the gear it shortened the tray by about 7 mm so most of my batteries would then not fit in the actual battery tray. I have a few that that do fit, however they're no longer manufactured so once the ones I have are too worn out to be used, I'm screwed.